Role of Non-catalytic Ligands in Macromolecule Function

dc.contributor.advisor Richard B. Honzatko
dc.contributor.author Watanabe, Muneaki
dc.contributor.department Roy J. Carver Department of Biochemistry, Biophysics and Molecular Biology (LAS)
dc.date 2018-08-11T14:56:43.000
dc.date.accessioned 2020-06-30T03:06:48Z
dc.date.available 2020-06-30T03:06:48Z
dc.date.copyright Fri Jan 01 00:00:00 UTC 2016
dc.date.embargo 2001-01-01
dc.date.issued 2016-01-01
dc.description.abstract <p>Human hexokinase Type-I (HKI) binds to the outer mitochondrial membrane, and in so doing protects the mitochondrion, controls adenine nucleotide flux through the membrane and blocks mitochondrion-linked apoptosis. Adenosine 5’-triphosphate (ATP) releases HKI from the outer mitochondrial membrane, but the mechanism of ATP release is unclear. ATP-release is not due to the generation of glucose 6-phosphate (G6P) from ATP and glucose or by the binding of ATP to HKI at its catalytic or regulatory domains. Instead, the voltage dependent anion channel (VDAC) has a high affinity binding site for ATP as revealed by titrations using ATP and fluorescent analogs of ATP. Single lysine-to-methionine mutations of 15 residues within the pore of VDAC link ATP binding to the NZ atom of Lys256. Giant unilamellar vesicles (GUVs) bind the N-terminal half of HKI only if VDAC is embedded in the vesicle bilayer, demonstrating VDAC alone is sufficient (and necessary) to localize HKI to a membrane. ATP releases the N-terminal half of HKI from VDAC-embedded GUVs, demonstrating ATP-release is due to the binding of ATP to VDAC.</p> <p>b-Ketoacyl–(acyl-carrier-protein) synthase III (FabH) catalyzes the first condensation reaction of fatty acid biosynthesis. Highly purified FabH from Escherichia coli is unstable at elevated concentrations and precipitates irreversibly from solution. FabH achieves high levels of stability as the acetyl adduct of Cys112, paired with chloride. The resting state in vivo for FabH may be as the chloride-stabilized acetyl adduct of Cys112.</p>
dc.format.mimetype application/pdf
dc.identifier archive/lib.dr.iastate.edu/etd/15837/
dc.identifier.articleid 6844
dc.identifier.contextkey 11165418
dc.identifier.doi https://doi.org/10.31274/etd-180810-5464
dc.identifier.s3bucket isulib-bepress-aws-west
dc.identifier.submissionpath etd/15837
dc.identifier.uri https://dr.lib.iastate.edu/handle/20.500.12876/30020
dc.language.iso en
dc.source.bitstream archive/lib.dr.iastate.edu/etd/15837/Watanabe_iastate_0097E_15473.pdf|||Fri Jan 14 20:47:21 UTC 2022
dc.subject.disciplines Biochemistry
dc.subject.disciplines Biophysics
dc.subject.disciplines Molecular Biology
dc.subject.keywords Confocal microscopy
dc.subject.keywords FabH
dc.subject.keywords Fluorescence
dc.subject.keywords Hexokinase
dc.subject.keywords Mitochondria
dc.subject.keywords VDAC
dc.title Role of Non-catalytic Ligands in Macromolecule Function
dc.type dissertation
dc.type.genre dissertation
dspace.entity.type Publication
relation.isOrgUnitOfPublication faf0a6cb-16ca-421c-8f48-9fbbd7bc3747
thesis.degree.discipline Biochemistry
thesis.degree.level dissertation
thesis.degree.name Doctor of Philosophy
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