Practical aspects of PRRSV RNA detection in processing fluids collected in commercial swine farms

dc.contributor.author López, Will A.
dc.contributor.author Zimmerman, Jeffrey
dc.contributor.author Gauger, Phillip
dc.contributor.author Harmon, Karen
dc.contributor.author Bradner, Laura
dc.contributor.author Zhang, Min
dc.contributor.author Giménez-Lirola, Luis
dc.contributor.author Ramirez, Alejandro
dc.contributor.author Cano, Jean Paul
dc.contributor.author Linhares, Daniel
dc.contributor.department Statistics
dc.contributor.department Veterinary Diagnostic and Production Animal Medicine
dc.contributor.department Veterinary Diagnostic Laboratory
dc.date 2020-05-19T03:50:24.000
dc.date.accessioned 2020-07-07T05:13:13Z
dc.date.available 2020-07-07T05:13:13Z
dc.date.copyright Wed Jan 01 00:00:00 UTC 2020
dc.date.embargo 2021-07-01
dc.date.issued 2020-07-01
dc.description.abstract <p>Processing fluid samples are easily collected under field conditions and provide the means to test more piglets more frequently in a practical way, thereby improving PRRSV surveillance. However, a deeper understanding of the diagnostic characteristics of this newly described sample type is still required. Therefore, the objective of this field-based study was to determine the relationship between viremic piglets and the detection of PRRSV RNA in processing fluid samples. In two PRRSV-positive breeding herds, processing fluids (n = 77) and individual piglet serum samples (n = 834) were collected from 77 litters in three sampling events and tested for PRRSV RNA. Among the 77 litters in the study, 55 litters (71.4%) contained no viremic piglets and processing fluids tested negative for PRRSV RNA. Among the 22 (28.6%) litters with ≥1 viremic piglets, 10 litters contained a single viremic piglet and 5 of the 10 processing fluids from this group tested positive for PRRSV RNA. Based on a fitted mixed effects logistic regression model, the probability of detecting PRRSV RNA in processing fluids was highly dependent on the number of viremic piglets contributing to the sample. When the within-litter prevalence was ≥39%, the probability of detecting PRRSV RNA in processing fluids was ≥95%. By extension, the results suggest that pooling processing fluids from several litters increases the probability of PRRSV RNA detection because of the greater likelihood of including multiple litters each with ≥1 viremic piglets. In contemporary breeding herds that use processing fluid samples for PRRSV surveillance, the diagnostic costs associated with testing 100% of the processing-age piglet population can be estimated at €0.077 ($0.086 USD) per pig weaned. In contrast, to achieve an equivalent testing coverage with the use of individual piglet serum samples, the diagnostic costs associated would be €4.48 ($5.00 USD) per pig weaned. Processing fluid represents a practical, reliable and efficient method to surveil breeding herds for PRRSV because it allows for continuous surveillance at a low cost.</p>
dc.description.comments <p>This is a manuscript of an article published as López, Will, Jeffrey J. Zimmerman, Phil Gauger, Karen Harmon, Laura Bradner, Min Zhang, Luis Giménez-Lirola, Alejandro Ramirez, Jean Paul Cano, and Daniel CL Linhares. "Practical aspects of PRRSV RNA detection in processing fluids collected in commercial swine farms." <em>Preventive Veterinary Medicine</em> (2020): 105021. DOI: <a href="https://doi.org/10.1016/j.prevetmed.2020.105021" target="_blank">10.1016/j.prevetmed.2020.105021</a>. Posted with permission.</p>
dc.format.mimetype application/pdf
dc.identifier archive/lib.dr.iastate.edu/vdpam_pubs/190/
dc.identifier.articleid 1194
dc.identifier.contextkey 17792199
dc.identifier.s3bucket isulib-bepress-aws-west
dc.identifier.submissionpath vdpam_pubs/190
dc.identifier.uri https://dr.lib.iastate.edu/handle/20.500.12876/92038
dc.language.iso en
dc.source.bitstream archive/lib.dr.iastate.edu/vdpam_pubs/190/2020_LinharesDaniel_PracticalAspects.pdf|||Fri Jan 14 21:51:26 UTC 2022
dc.source.uri 10.1016/j.prevetmed.2020.105021
dc.subject.disciplines Large or Food Animal and Equine Medicine
dc.subject.disciplines Veterinary Infectious Diseases
dc.subject.disciplines Veterinary Preventive Medicine, Epidemiology, and Public Health
dc.subject.keywords Swine
dc.subject.keywords PRRS virus
dc.subject.keywords Processing fluids
dc.subject.keywords Surveillance
dc.subject.keywords Monitoring
dc.title Practical aspects of PRRSV RNA detection in processing fluids collected in commercial swine farms
dc.type article
dc.type.genre article
dspace.entity.type Publication
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