Statistical methods to estimate the relative contribution of individual effective dose and stochastic models in toxicology

dc.contributor.advisor Philip M. Dixon
dc.contributor.author Yum, Man Yu
dc.contributor.department Statistics
dc.date 2018-08-11T09:55:42.000
dc.date.accessioned 2020-06-30T02:37:28Z
dc.date.available 2020-06-30T02:37:28Z
dc.date.copyright Fri Jan 01 00:00:00 UTC 2010
dc.date.embargo 2013-06-05
dc.date.issued 2010-01-01
dc.description.abstract <p>For decades, the individual effective dose (IED) hypothesis proposed by Gaddum (1953) has been accepted as the sole explanation for the lognormal or log logistic model fitted to dose–response data. It is postulated that each individual has a unique individual tolerance, or an IED, beyond which it dies. Since the survival of an individual is determined by both the exposure intensity and the exposure duration, IED can also be taken as the exposure duration one can tolerate under any fixed dose. Instead of contributing survival to an innate characteristic of the individual, an alternative hypothesis explains survival as governed by a stochastic process occurring similarly in all individuals.</p> <p>In this dissertation, we propose using the correlation coefficient to evaluate the relative contribution of IED and stochasticity. We consider experiments in which a group of testing organisms was twice exposed to the same concentration of a toxicant. Our models are fitted to five sets of interval censored times-to-death (TTD) data with proof censoring.</p> <p>Based on the equal means and variances assumptions of TTDs during the two exposures, we develop a maximum likelihood estimator of the correlation based on a bivariate lognormal model. A graphical tool is developed to assess the normality of the unobserved marginal distribution of TTDs in the second exposure based on the conditional distribution and a scaled conditional function.</p> <p>We also fit the same model under the Bayesian framework. We further propose relaxing the equal means and variances assumptions using a set of constrained informative priors. These models demonstrate robust inference about the correlation against 10–15% difference in median TTDs and ratio of standard deviations. Coupled with the powerful posterior predictive diagnostic tool, the Bayesian model has provided informative inference about the correlation.</p> <p>Compared to previous findings, our Bayesian results lead to a similar conclusion for the NaPCP experiment, but not for the CuSO<sub>4</sub> and the NaCl experiments. We conclude that NaPCP is dominated slightly by a stochastic mechanism. However, there was 78% and 92% chance of IED dominance for CuSO4, and only 58% chance of IED dominance for NaCl. Our investigation ends with the exploration of an accelerated failure time model with shared frailty as an alternative to the bivariate lognormal model.</p>
dc.format.mimetype application/pdf
dc.identifier archive/lib.dr.iastate.edu/etd/11689/
dc.identifier.articleid 2735
dc.identifier.contextkey 2807933
dc.identifier.doi https://doi.org/10.31274/etd-180810-2624
dc.identifier.s3bucket isulib-bepress-aws-west
dc.identifier.submissionpath etd/11689
dc.identifier.uri https://dr.lib.iastate.edu/handle/20.500.12876/25895
dc.language.iso en
dc.source.bitstream archive/lib.dr.iastate.edu/etd/11689/Yum_iastate_0097E_11067.pdf|||Fri Jan 14 18:55:41 UTC 2022
dc.subject.disciplines Statistics and Probability
dc.subject.keywords bivariate lognormal model
dc.subject.keywords individual effective dose
dc.subject.keywords informative Bayesian prior
dc.subject.keywords interval censored data
dc.subject.keywords proof censoring
dc.title Statistical methods to estimate the relative contribution of individual effective dose and stochastic models in toxicology
dc.type article
dc.type.genre dissertation
dspace.entity.type Publication
relation.isOrgUnitOfPublication 264904d9-9e66-4169-8e11-034e537ddbca
thesis.degree.level dissertation
thesis.degree.name Doctor of Philosophy
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