The tuatara genome reveals ancient features of amniote evolution

dc.contributor.author Gemmell, Neil J.
dc.contributor.author Valenzuela, Nicole
dc.contributor.author Velásquez Zapata, Valeria
dc.contributor.author Wu, Zhiqiang
dc.contributor.author et al.
dc.contributor.department Ecology, Evolution and Organismal Biology
dc.date.accessioned 2022-04-04T18:30:31Z
dc.date.available 2022-04-04T18:30:31Z
dc.date.issued 2020-08-20
dc.description.abstract The tuatara (Sphenodon punctatus)—the only living member of the reptilian order Rhynchocephalia (Sphenodontia), once widespread across Gondwana1,2—is an iconic species that is endemic to New Zealand2,3. A key link to the now-extinct stem reptiles (from which dinosaurs, modern reptiles, birds and mammals evolved), the tuatara provides key insights into the ancestral amniotes2,4. Here we analyse the genome of the tuatara, which—at approximately 5 Gb—is among the largest of the vertebrate genomes yet assembled. Our analyses of this genome, along with comparisons with other vertebrate genomes, reinforce the uniqueness of the tuatara. Phylogenetic analyses indicate that the tuatara lineage diverged from that of snakes and lizards around 250 million years ago. This lineage also shows moderate rates of molecular evolution, with instances of punctuated evolution. Our genome sequence analysis identifies expansions of proteins, non-protein-coding RNA families and repeat elements, the latter of which show an amalgam of reptilian and mammalian features. The sequencing of the tuatara genome provides a valuable resource for deep comparative analyses of tetrapods, as well as for tuatara biology and conservation. Our study also provides important insights into both the technical challenges and the cultural obligations that are associated with genome sequencing.
dc.description.comments This article is published as Gemmell, N.J., Rutherford, K., Prost, S. et al. The tuatara genome reveals ancient features of amniote evolution. Nature 584, 403–409 (2020). https://doi.org/10.1038/s41586-020-2561-9. Posted with permission. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
dc.identifier.uri https://dr.lib.iastate.edu/handle/20.500.12876/ywAbGOWv
dc.language.iso en
dc.publisher © The Author(s) 2020
dc.source.uri https://doi.org/10.1038/s41586-020-2561-9 *
dc.title The tuatara genome reveals ancient features of amniote evolution
dc.type Article
dspace.entity.type Publication
relation.isAuthorOfPublication cc984ec0-a821-45f2-895d-e5fd76250b94
relation.isOrgUnitOfPublication fb57c4c9-fba7-493f-a416-7091a6ecedf1
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